MySQL MCP Server Pro vs MCP Toolbox for Databases (BigQuery)

A side-by-side comparison of two Databases servers — tools, transport, auth, maintenance, and copy-paste config for each.

	MySQL MCP Server Pro MySQL CRUD plus anomaly analysis: SQL optimization, health checks, lock and index diagnostics, with role-based permissions. Unverified stdio (local) OAuth Stale Python	MCP Toolbox for Databases (BigQuery) Google's official MCP server with prebuilt BigQuery tools, querying datasets via Application Default Credentials. Verified stdio (local) OAuth Go
Category	Databases	Databases
Language	Python	Go
Transport	stdio (local)	stdio (local)
Auth	OAuth	OAuth
GitHub stars	246	16k
Last commit	9 months ago	15 days ago
Verified
Actively maintained
Install	`pip install mysql_mcp_server_pro`	`brew install mcp-toolbox && toolbox --prebuilt bigquery --stdio`
Repo	Open	Open

Verdict

Pick MySQL MCP Server Pro if you prefer its approach (mysql crud plus anomaly analysis: sql optimization, health checks, lock and index diagnostics, with role-based permissions).

Pick MCP Toolbox for Databases (BigQuery) if you want the official, vendor-maintained server, and you prefer the more popular, battle-tested option.

Add MySQL MCP Server Pro

Install / run

pip install mysql_mcp_server_pro

Paste into ~/Library/Application Support/Claude/claude_desktop_config.json

{
  "mcpServers": {
    "mysql-mcp-server-pro": {
      "command": "uvx",
      "args": [
        "--from",
        "mysql_mcp_server_pro",
        "mysql_mcp_server_pro",
        "--mode",
        "stdio"
      ],
      "env": {
        "MYSQL_HOST": "192.168.x.xxx",
        "MYSQL_PORT": "3306",
        "MYSQL_USER": "root",
        "MYSQL_PASSWORD": "root",
        "MYSQL_DATABASE": "a_llm",
        "MYSQL_ROLE": "admin"
      }
    }
  }
}

Requires `uv` (the Python package runner). Install it from https://docs.astral.sh/uv/ if `uvx` is not found.

Add MCP Toolbox for Databases (BigQuery)

Install / run

brew install mcp-toolbox && toolbox --prebuilt bigquery --stdio

Paste into ~/Library/Application Support/Claude/claude_desktop_config.json

{
  "mcpServers": {
    "mcp-toolbox-for-databases-bigquery": {
      "command": "/absolute/path/to/toolbox",
      "args": [
        "--prebuilt",
        "bigquery",
        "--stdio"
      ],
      "env": {
        "BIGQUERY_PROJECT": "<your-gcp-project-id>"
      }
    }
  }
}

FAQ

MySQL MCP Server Pro or MCP Toolbox for Databases (BigQuery) — which is better?

Pick MySQL MCP Server Pro if you prefer its approach (mysql crud plus anomaly analysis: sql optimization, health checks, lock and index diagnostics, with role-based permissions). Pick MCP Toolbox for Databases (BigQuery) if you want the official, vendor-maintained server, and you prefer the more popular, battle-tested option.

Can I use both MySQL MCP Server Pro and MCP Toolbox for Databases (BigQuery)?

Yes — MCP clients let you enable multiple servers at once. Add both configs to your client's mcpServers and use whichever tool fits the task.

Do MySQL MCP Server Pro and MCP Toolbox for Databases (BigQuery) work with Claude, Cursor and Windsurf?

Both do. Copy the per-client config below into Claude Desktop, Cursor, or Windsurf.

View MySQL MCP Server Pro →View MCP Toolbox for Databases (BigQuery) →More comparisons →