MySQL MCP Server vs Neon MCP Server

A side-by-side comparison of two Databases servers — tools, transport, auth, maintenance, and copy-paste config for each.

	MySQL MCP Server Secure, structured access to MySQL databases for AI clients — query, sample, and inspect schemas via MCP. Unverified stdio (local) No auth Python	Neon MCP Server Manage serverless Postgres on Neon with natural language: projects, branches, migrations, and SQL. Verified HTTP (remote) OAuth TypeScript
Category	Databases	Databases
Language	Python	TypeScript
Transport	stdio (local)	HTTP (remote)
Auth	None	OAuth
GitHub stars	1.3k	2.1k
Last commit	11 days ago	2 months ago
Verified
Actively maintained
Install	`pip install mysql-mcp-server`	`npx -y mcp-remote https://mcp.neon.tech/mcp`
Repo	Open	Open

Verdict

Pick MySQL MCP Server if you want a local (stdio) server that keeps data on your machine, and you want zero-setup with no API key.

Pick Neon MCP Server if you want the official, vendor-maintained server, and you prefer the more popular, battle-tested option.

Add MySQL MCP Server

Install / run

pip install mysql-mcp-server

Paste into ~/Library/Application Support/Claude/claude_desktop_config.json

{
  "mcpServers": {
    "mysql-mcp-server": {
      "command": "uv",
      "args": [
        "--directory",
        "path/to/mysql_mcp_server",
        "run",
        "mysql_mcp_server"
      ],
      "env": {
        "MYSQL_HOST": "localhost",
        "MYSQL_PORT": "3306",
        "MYSQL_USER": "your_username",
        "MYSQL_PASSWORD": "your_password",
        "MYSQL_DATABASE": "your_database"
      }
    }
  }
}

Add Neon MCP Server

Install / run

npx -y mcp-remote https://mcp.neon.tech/mcp

Paste into ~/Library/Application Support/Claude/claude_desktop_config.json

{
  "mcpServers": {
    "neon-mcp-server": {
      "command": "npx",
      "args": [
        "-y",
        "mcp-remote",
        "https://mcp.neon.tech/mcp"
      ]
    }
  }
}

Claude Desktop connects to remote servers through the `mcp-remote` proxy (installed on first run via npx). Restart Claude Desktop after saving.

FAQ

MySQL MCP Server or Neon MCP Server — which is better?

Pick MySQL MCP Server if you want a local (stdio) server that keeps data on your machine, and you want zero-setup with no API key. Pick Neon MCP Server if you want the official, vendor-maintained server, and you prefer the more popular, battle-tested option.

Can I use both MySQL MCP Server and Neon MCP Server?

Yes — MCP clients let you enable multiple servers at once. Add both configs to your client's mcpServers and use whichever tool fits the task.

Do MySQL MCP Server and Neon MCP Server work with Claude, Cursor and Windsurf?

Both do. Copy the per-client config below into Claude Desktop, Cursor, or Windsurf.

View MySQL MCP Server →View Neon MCP Server →More comparisons →