MySQL MCP Server vs Supabase MCP Server

A side-by-side comparison of two Databases servers — tools, transport, auth, maintenance, and copy-paste config for each.

	MySQL MCP Server Secure, structured access to MySQL databases for AI clients — query, sample, and inspect schemas via MCP. Unverified stdio (local) No auth Python	Supabase MCP Server Official Supabase server: manage tables, run SQL, branches, configs and edge functions from your AI client. Verified HTTP (remote) OAuth TypeScript
Category	Databases	Databases
Language	Python	TypeScript
Transport	stdio (local)	HTTP (remote)
Auth	None	OAuth
GitHub stars	1.3k	2.7k
Last commit	11 days ago	1 month ago
Verified
Actively maintained
Install	`pip install mysql-mcp-server`	`Add remote URL https://mcp.supabase.com/mcp to your MCP client (OAuth login)`
Repo	Open	Open

Verdict

Pick MySQL MCP Server if you want a local (stdio) server that keeps data on your machine, and you want zero-setup with no API key.

Pick Supabase MCP Server if you want the official, vendor-maintained server, and you prefer the more popular, battle-tested option.

Add MySQL MCP Server

Install / run

pip install mysql-mcp-server

Paste into ~/Library/Application Support/Claude/claude_desktop_config.json

{
  "mcpServers": {
    "mysql-mcp-server": {
      "command": "uv",
      "args": [
        "--directory",
        "path/to/mysql_mcp_server",
        "run",
        "mysql_mcp_server"
      ],
      "env": {
        "MYSQL_HOST": "localhost",
        "MYSQL_PORT": "3306",
        "MYSQL_USER": "your_username",
        "MYSQL_PASSWORD": "your_password",
        "MYSQL_DATABASE": "your_database"
      }
    }
  }
}

Add Supabase MCP Server

Install / run

Add remote URL https://mcp.supabase.com/mcp to your MCP client (OAuth login)

Paste into ~/Library/Application Support/Claude/claude_desktop_config.json

{
  "mcpServers": {
    "supabase-mcp-server": {
      "command": "npx",
      "args": [
        "-y",
        "mcp-remote",
        "https://mcp.supabase.com/mcp?read_only=true&project_ref=<your-project-ref>"
      ]
    }
  }
}

Claude Desktop connects to remote servers through the `mcp-remote` proxy (installed on first run via npx). Restart Claude Desktop after saving.

FAQ

MySQL MCP Server or Supabase MCP Server — which is better?

Pick MySQL MCP Server if you want a local (stdio) server that keeps data on your machine, and you want zero-setup with no API key. Pick Supabase MCP Server if you want the official, vendor-maintained server, and you prefer the more popular, battle-tested option.

Can I use both MySQL MCP Server and Supabase MCP Server?

Yes — MCP clients let you enable multiple servers at once. Add both configs to your client's mcpServers and use whichever tool fits the task.

Do MySQL MCP Server and Supabase MCP Server work with Claude, Cursor and Windsurf?

Both do. Copy the per-client config below into Claude Desktop, Cursor, or Windsurf.

View MySQL MCP Server →View Supabase MCP Server →More comparisons →